Graffold Documentation¶
Knowledge graph platform for biomedical research. Turns literature and datasets into a queryable, semantically-rich knowledge graph.
Getting Started¶
Architecture¶
Ingestion¶
- graffold-ingest — Pipeline architecture, connectors, API
- Benchmarks — Throughput and accuracy measurements
- Entity Consolidation
- PPI Framework
- PDF Extraction
- Incremental Updates
Integration¶
- biot CLI — the supported interface: composable discovery commands grounded in the Graffold KG
Querying¶
Development¶
- API Reference
- SDK Reference — Python client for graffold-api
- CLI & TUI
- Testing Guide